Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 CRYGFP-201ENST00000418459 633 ntBASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 TMEM179-206ENST00000616017 1645 ntBASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G3Q9Y6M4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 LINC01521-201ENST00000504184 1943 ntBASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 RCC2P6-201ENST00000526625 1557 ntBASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 BX119927.1-201ENST00000636596 1552 ntBASIC19.08■□□□□ 0.65
CSNK1G3Q9Y6M4 ARMC10P1-201ENST00000313754 855 ntBASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 AC004951.3-201ENST00000418645 1148 ntBASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CSNK1G3Q9Y6M4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 KRT18P57-201ENST00000443599 1254 ntBASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 AC011298.2-201ENST00000617989 482 ntBASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 SMG8-203ENST00000578922 2178 ntBASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 KRT8P8-201ENST00000434750 1448 ntBASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 LINC01006-201ENST00000333319 2292 ntBASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CSNK1G3Q9Y6M4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 LIN28AP1-201ENST00000429574 405 ntBASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.06■□□□□ 0.64
CSNK1G3Q9Y6M4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms