Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 AL390961.4-201ENST00000623958 2535 ntBASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP4B1Q9Y6B7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 GPX1P1-201ENST00000388829 606 ntBASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 AL050303.2-201ENST00000619798 666 ntBASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 AC020916.1-201ENST00000587762 1774 ntBASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 BX119927.1-201ENST00000636596 1552 ntBASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4B1Q9Y6B7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 CROCCP3-202ENST00000420820 1947 ntBASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 ID1-201ENST00000376105 1233 ntBASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 AF201337.1-201ENST00000520239 748 ntBASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 FAM21FP-204ENST00000608637 956 ntBASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 AC009113.1-201ENST00000570267 2443 ntBASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4B1Q9Y6B7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 AC007322.3-201ENST00000426526 701 ntBASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 AC083906.2-201ENST00000511578 360 ntBASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.65■□□□□ 0.58
AP4B1Q9Y6B7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms