Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 NBPF21P-201ENST00000425093 1451 ntBASIC20.27■□□□□ 0.84
RAD54BQ9Y620 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAD54BQ9Y620 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAD54BQ9Y620 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RAD54BQ9Y620 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
RAD54BQ9Y620 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.27■□□□□ 0.83
RAD54BQ9Y620 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RAD54BQ9Y620 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.27■□□□□ 0.83
RAD54BQ9Y620 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RAD54BQ9Y620 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.27■□□□□ 0.83
RAD54BQ9Y620 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 TFP1-202ENST00000475455 1573 ntBASIC20.26■□□□□ 0.83
RAD54BQ9Y620 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 AL355075.4-201ENST00000554988 638 ntBASIC20.26■□□□□ 0.83
RAD54BQ9Y620 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.26■□□□□ 0.83
RAD54BQ9Y620 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD54BQ9Y620 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.25■□□□□ 0.83
RAD54BQ9Y620 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 AL121906.2-201ENST00000621597 723 ntBASIC20.25■□□□□ 0.83
RAD54BQ9Y620 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAD54BQ9Y620 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAD54BQ9Y620 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD54BQ9Y620 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RAD54BQ9Y620 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.24■□□□□ 0.83
RAD54BQ9Y620 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAD54BQ9Y620 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RAD54BQ9Y620 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAD54BQ9Y620 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAD54BQ9Y620 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RAD54BQ9Y620 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms