Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.44■□□□□ 0.86
HCFC2Q9Y5Z7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 LINC01465-201ENST00000408887 1940 ntBASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 AC008622.2-201ENST00000617006 1229 ntBASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 AC005332.1-201ENST00000577698 1310 ntBASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.43■□□□□ 0.86
HCFC2Q9Y5Z7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 DUSP5P1-201ENST00000441325 1139 ntBASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 AP003041.3-201ENST00000527151 707 ntBASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 AC116407.4-201ENST00000623319 1061 ntBASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 BX119927.1-201ENST00000636596 1552 ntBASIC20.42■□□□□ 0.86
HCFC2Q9Y5Z7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 TPM4P1-201ENST00000436100 807 ntBASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 KRT18P38-201ENST00000449496 1282 ntBASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 PRSS44-201ENST00000515154 1146 ntBASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 CKBP1-201ENST00000565489 1086 ntBASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC2Q9Y5Z7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms