Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.84■■□□□ 1.09
COL4A3BPQ9Y5P4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL4A3BPQ9Y5P4 AL049637.2-201ENST00000641778 930 ntBASIC21.84■■□□□ 1.09
COL4A3BPQ9Y5P4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.84■■□□□ 1.09
COL4A3BPQ9Y5P4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL4A3BPQ9Y5P4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL4A3BPQ9Y5P4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL4A3BPQ9Y5P4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL4A3BPQ9Y5P4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 AP001412.1-201ENST00000608405 714 ntBASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL4A3BPQ9Y5P4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.83■■□□□ 1.08
COL4A3BPQ9Y5P4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL4A3BPQ9Y5P4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL4A3BPQ9Y5P4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL4A3BPQ9Y5P4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL4A3BPQ9Y5P4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
COL4A3BPQ9Y5P4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 HTR7P1-201ENST00000538670 1336 ntBASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 AL158211.5-201ENST00000623583 2518 ntBASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A3BPQ9Y5P4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
COL4A3BPQ9Y5P4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 AP006587.1-201ENST00000534129 1502 ntBASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 AC113410.3-201ENST00000623366 203 ntBASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A3BPQ9Y5P4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
COL4A3BPQ9Y5P4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A3BPQ9Y5P4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
COL4A3BPQ9Y5P4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A3BPQ9Y5P4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.79■■□□□ 1.08
COL4A3BPQ9Y5P4 TSPY7P-201ENST00000431358 1114 ntBASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms