Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN16Q9Y5I7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 FAM197Y1-201ENST00000421178 764 ntBASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 AC004980.1-204ENST00000429707 299 ntBASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 CD177P1-201ENST00000606252 935 ntBASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 LINC01465-201ENST00000408887 1940 ntBASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN16Q9Y5I7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 TSPY7P-201ENST00000431358 1114 ntBASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 SNORA78-201ENST00000459373 127 ntBASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CLDN16Q9Y5I7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 AC104417.2-201ENST00000562989 1793 ntBASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 MIR4497-201ENST00000583208 89 ntBASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 AP001412.1-201ENST00000608405 714 ntBASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLDN16Q9Y5I7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 KRT16P1-201ENST00000399124 1418 ntBASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 MESTP1-201ENST00000404287 994 ntBASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 Z85996.1-201ENST00000494644 937 ntBASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 CR392000.1-201ENST00000624770 1228 ntBASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN16Q9Y5I7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 ZNF815P-204ENST00000434898 1737 ntBASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms