Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LSM5Q9Y4Y9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 UNC93B3-201ENST00000308076 687 ntBASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 MIR572-201ENST00000384983 95 ntBASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 AC099791.1-201ENST00000416440 715 ntBASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LSM5Q9Y4Y9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 AL133373.2-201ENST00000623187 2828 ntBASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 PCDHB18P-201ENST00000524813 2368 ntBASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 AC131281.2-201ENST00000520478 145 ntBASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LSM5Q9Y4Y9 AL161938.1-201ENST00000569833 2180 ntBASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LSM5Q9Y4Y9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms