Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 AC005082.1-201ENST00000413042 2259 ntBASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 AC073210.2-201ENST00000430369 194 ntBASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 AC098934.4-201ENST00000564127 592 ntBASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 MYC-209ENST00000641252 345 ntBASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 AC093503.3-201ENST00000624917 2352 ntBASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
RNF11Q9Y3C5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 AC124283.5-201ENST00000624661 1809 ntBASIC19■□□□□ 0.63
RNF11Q9Y3C5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 RER1-204ENST00000378518 522 ntTSL 3 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 AC097658.1-201ENST00000475555 843 ntBASIC19■□□□□ 0.63
RNF11Q9Y3C5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19■□□□□ 0.63
RNF11Q9Y3C5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF11Q9Y3C5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 Z82202.1-201ENST00000623446 1880 ntBASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 TFP1-202ENST00000475455 1573 ntBASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 AL109923.1-201ENST00000618799 583 ntBASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF11Q9Y3C5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 AC092368.3-202ENST00000574180 1591 ntBASIC18.98■□□□□ 0.63
RNF11Q9Y3C5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF11Q9Y3C5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF11Q9Y3C5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF11Q9Y3C5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF11Q9Y3C5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF11Q9Y3C5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms