Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 KRT18P68-201ENST00000392293 1000 ntBASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 AC023632.3-201ENST00000521633 145 ntBASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D4Q9Y2X8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 AC141586.3-201ENST00000562166 1838 ntBASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2D4Q9Y2X8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 AC006333.2-201ENST00000607957 2099 ntBASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 AL049812.1-201ENST00000432563 2267 ntBASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.55□□□□□ -0.24
UBE2D4Q9Y2X8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms