Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 AC233992.3-201ENST00000607491 485 ntBASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 AC093525.10-201ENST00000625130 1569 ntBASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCH1Q9Y2L9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 AIRN-201ENST00000601203 4374 ntBASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 AC008764.7-201ENST00000593779 1081 ntBASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRCH1Q9Y2L9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 HCG11-201ENST00000411553 5696 ntBASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 AC099791.1-201ENST00000416440 715 ntBASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 AC105265.2-201ENST00000467189 838 ntBASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 AC124067.4-201ENST00000519691 2379 ntBASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 AC141586.5-201ENST00000624546 2050 ntBASIC18.48■□□□□ 0.55
LRCH1Q9Y2L9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRCH1Q9Y2L9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms