Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 AL390719.1-204ENST00000412397 1219 ntBASIC15.76■□□□□ 0.11
FOXA2Q9Y261 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXA2Q9Y261 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 LINC01465-201ENST00000408887 1940 ntBASIC15.75■□□□□ 0.11
FOXA2Q9Y261 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXA2Q9Y261 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 KRT18P6-201ENST00000555540 1265 ntBASIC15.74■□□□□ 0.11
FOXA2Q9Y261 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
FOXA2Q9Y261 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXA2Q9Y261 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms