Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 CROCCP5-201ENST00000436658 830 ntBASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 AC093787.1-201ENST00000450396 207 ntBASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 AC105020.6-201ENST00000621523 1217 ntBASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 DPP3P2-201ENST00000416030 1696 ntBASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HHLA3Q9XRX5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 AC083906.2-201ENST00000511578 360 ntBASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 AL121832.2-201ENST00000610979 668 ntBASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.24□□□□□ -0.13
HHLA3Q9XRX5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 AL050303.2-201ENST00000619798 666 ntBASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.23□□□□□ -0.13
HHLA3Q9XRX5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HHLA3Q9XRX5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms