Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 AC022517.1-201ENST00000592429 346 ntBASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 MIR5787-201ENST00000611784 55 ntBASIC19.83■□□□□ 0.77
CHMP2BQ9UQN3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP2BQ9UQN3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.83■□□□□ 0.76
CHMP2BQ9UQN3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.83■□□□□ 0.76
CHMP2BQ9UQN3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP2BQ9UQN3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CHMP2BQ9UQN3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP2BQ9UQN3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP2BQ9UQN3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP2BQ9UQN3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CHMP2BQ9UQN3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 AC133552.2-202ENST00000575694 574 ntBASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 MKRN4P-201ENST00000444706 1521 ntBASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2BQ9UQN3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 AL050303.2-201ENST00000619798 666 ntBASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms