Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
UBQLN1Q9UMX0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
UBQLN1Q9UMX0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 MESTP1-201ENST00000404287 994 ntBASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 B3GAT3P1-201ENST00000471720 806 ntBASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
UBQLN1Q9UMX0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 AC011506.1-201ENST00000474329 610 ntBASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 AL160286.2-201ENST00000567150 934 ntBASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.93■□□□□ 0.94
UBQLN1Q9UMX0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 AC079598.2-202ENST00000546624 1451 ntBASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN1Q9UMX0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms