Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 CD177P1-201ENST00000606252 935 ntBASIC22.42■■□□□ 1.18
DDX41Q9UJV9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX41Q9UJV9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX41Q9UJV9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 FAM197Y1-201ENST00000421178 764 ntBASIC22.4■■□□□ 1.18
DDX41Q9UJV9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 AP003071.4-201ENST00000562276 1284 ntBASIC22.4■■□□□ 1.18
DDX41Q9UJV9 LINC01023-201ENST00000606054 436 ntBASIC22.4■■□□□ 1.18
DDX41Q9UJV9 AC073195.1-201ENST00000607241 877 ntBASIC22.4■■□□□ 1.18
DDX41Q9UJV9 AC073314.1-201ENST00000568729 2216 ntBASIC22.4■■□□□ 1.18
DDX41Q9UJV9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.4■■□□□ 1.18
DDX41Q9UJV9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
DDX41Q9UJV9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
DDX41Q9UJV9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.39■■□□□ 1.18
DDX41Q9UJV9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
DDX41Q9UJV9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX41Q9UJV9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 AC087499.1-201ENST00000418141 1075 ntBASIC22.38■■□□□ 1.17
DDX41Q9UJV9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
DDX41Q9UJV9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms