Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 AC079598.2-202ENST00000546624 1451 ntBASIC18.37■□□□□ 0.53
CTSFQ9UBX1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 AC009237.14-201ENST00000609975 1594 ntBASIC18.37■□□□□ 0.53
CTSFQ9UBX1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSFQ9UBX1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 UNC93B2-201ENST00000285383 730 ntBASIC18.36■□□□□ 0.53
CTSFQ9UBX1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 AC004980.1-204ENST00000429707 299 ntBASIC18.36■□□□□ 0.53
CTSFQ9UBX1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 KRT8P8-201ENST00000434750 1448 ntBASIC18.36■□□□□ 0.53
CTSFQ9UBX1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 AC116562.2-201ENST00000507042 360 ntBASIC18.36■□□□□ 0.53
CTSFQ9UBX1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 AC026271.3-201ENST00000571884 352 ntBASIC18.36■□□□□ 0.53
CTSFQ9UBX1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 AC133561.5-201ENST00000635547 218 ntBASIC18.36■□□□□ 0.53
CTSFQ9UBX1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTSFQ9UBX1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 TCF3P1-201ENST00000423021 1937 ntBASIC18.35■□□□□ 0.53
CTSFQ9UBX1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 LINC01023-201ENST00000606054 436 ntBASIC18.35■□□□□ 0.53
CTSFQ9UBX1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTSFQ9UBX1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 MESTP1-201ENST00000404287 994 ntBASIC18.34■□□□□ 0.53
CTSFQ9UBX1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTSFQ9UBX1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTSFQ9UBX1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.33■□□□□ 0.53
CTSFQ9UBX1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTSFQ9UBX1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CTSFQ9UBX1 KRT8P9-201ENST00000558927 1449 ntBASIC18.33■□□□□ 0.53
CTSFQ9UBX1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTSFQ9UBX1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTSFQ9UBX1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CTSFQ9UBX1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTSFQ9UBX1 MMP23A-201ENST00000234610 1017 ntBASIC18.33■□□□□ 0.52
CTSFQ9UBX1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTSFQ9UBX1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTSFQ9UBX1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.33■□□□□ 0.52
CTSFQ9UBX1 MIR1238-201ENST00000408483 83 ntBASIC18.33■□□□□ 0.52
CTSFQ9UBX1 AL390955.1-201ENST00000428694 934 ntBASIC18.33■□□□□ 0.52
CTSFQ9UBX1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms