Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KRT8P8-201ENST00000434750 1448 ntBASIC17.89■□□□□ 0.46
LRFN1Q9P244 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LRFN1Q9P244 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
LRFN1Q9P244 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
LRFN1Q9P244 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LRFN1Q9P244 AL390955.1-201ENST00000428694 934 ntBASIC17.89■□□□□ 0.45
LRFN1Q9P244 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 FITM1-202ENST00000559294 800 ntBASIC17.89■□□□□ 0.45
LRFN1Q9P244 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.89■□□□□ 0.45
LRFN1Q9P244 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.89■□□□□ 0.45
LRFN1Q9P244 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
LRFN1Q9P244 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LRFN1Q9P244 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 AL691432.2-201ENST00000607222 2038 ntBASIC17.89■□□□□ 0.45
LRFN1Q9P244 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.89■□□□□ 0.45
LRFN1Q9P244 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRFN1Q9P244 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LRFN1Q9P244 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.88■□□□□ 0.45
LRFN1Q9P244 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.88■□□□□ 0.45
LRFN1Q9P244 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LRFN1Q9P244 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 B3GAT3P1-201ENST00000471720 806 ntBASIC17.88■□□□□ 0.45
LRFN1Q9P244 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.88■□□□□ 0.45
LRFN1Q9P244 HLA-A-209ENST00000638375 975 ntBASIC17.88■□□□□ 0.45
LRFN1Q9P244 AL162377.1-201ENST00000618844 1793 ntBASIC17.88■□□□□ 0.45
LRFN1Q9P244 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 KRT8P9-201ENST00000558927 1449 ntBASIC17.88■□□□□ 0.45
LRFN1Q9P244 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LRFN1Q9P244 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRFN1Q9P244 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 MESTP1-201ENST00000404287 994 ntBASIC17.87■□□□□ 0.45
LRFN1Q9P244 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 NAPSB-206ENST00000562112 1266 ntBASIC17.87■□□□□ 0.45
LRFN1Q9P244 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRFN1Q9P244 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRFN1Q9P244 AC092667.1-201ENST00000434301 2586 ntBASIC17.86■□□□□ 0.45
LRFN1Q9P244 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.86■□□□□ 0.45
LRFN1Q9P244 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRFN1Q9P244 AC011506.1-201ENST00000474329 610 ntBASIC17.86■□□□□ 0.45
LRFN1Q9P244 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms