Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 AL023875.1-201ENST00000640777 796 ntBASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NCKIPSDQ9NZQ3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 AC006557.6-201ENST00000623071 864 ntBASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCKIPSDQ9NZQ3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.7■□□□□ 0.74
NCKIPSDQ9NZQ3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 KRASP1-201ENST00000407852 552 ntBASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 RARRES2P10-201ENST00000564312 460 ntBASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 MIR4785-201ENST00000585005 73 ntBASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 AC087289.5-201ENST00000586076 3175 ntBASIC19.69■□□□□ 0.74
NCKIPSDQ9NZQ3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 AC023632.3-201ENST00000521633 145 ntBASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 REXO1L12P-201ENST00000622156 912 ntBASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 AL049637.2-201ENST00000641778 930 ntBASIC19.68■□□□□ 0.74
NCKIPSDQ9NZQ3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms