Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPHK1Q9NYA1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 MIR4497-201ENST00000583208 89 ntBASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 CD177P1-201ENST00000606252 935 ntBASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 AP001412.1-201ENST00000608405 714 ntBASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.82■□□□□ 0.6
SPHK1Q9NYA1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPHK1Q9NYA1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 CR392000.1-201ENST00000624770 1228 ntBASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 HLA-A-209ENST00000638375 975 ntBASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SPHK1Q9NYA1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 KSR1P1-201ENST00000446298 240 ntBASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHK1Q9NYA1 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms