Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
RBM28Q9NW13 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.66■■□□□ 1.22
RBM28Q9NW13 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RBM28Q9NW13 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.66■■□□□ 1.22
RBM28Q9NW13 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.66■■□□□ 1.22
RBM28Q9NW13 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.66■■□□□ 1.22
RBM28Q9NW13 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RBM28Q9NW13 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.66■■□□□ 1.22
RBM28Q9NW13 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RBM28Q9NW13 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RBM28Q9NW13 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RBM28Q9NW13 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RBM28Q9NW13 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RBM28Q9NW13 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RBM28Q9NW13 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RBM28Q9NW13 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RBM28Q9NW13 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RBM28Q9NW13 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RBM28Q9NW13 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RBM28Q9NW13 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.65■■□□□ 1.22
RBM28Q9NW13 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RBM28Q9NW13 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
RBM28Q9NW13 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.64■■□□□ 1.22
RBM28Q9NW13 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.64■■□□□ 1.22
RBM28Q9NW13 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
RBM28Q9NW13 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.64■■□□□ 1.22
RBM28Q9NW13 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RBM28Q9NW13 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.64■■□□□ 1.22
RBM28Q9NW13 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RBM28Q9NW13 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RBM28Q9NW13 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
RBM28Q9NW13 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RBM28Q9NW13 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RBM28Q9NW13 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RBM28Q9NW13 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.64■■□□□ 1.21
RBM28Q9NW13 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RBM28Q9NW13 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.64■■□□□ 1.21
RBM28Q9NW13 RARRES2P10-201ENST00000564312 460 ntBASIC22.64■■□□□ 1.21
RBM28Q9NW13 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.64■■□□□ 1.21
RBM28Q9NW13 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RBM28Q9NW13 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.64■■□□□ 1.21
RBM28Q9NW13 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RBM28Q9NW13 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
RBM28Q9NW13 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RBM28Q9NW13 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RBM28Q9NW13 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
RBM28Q9NW13 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RBM28Q9NW13 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RBM28Q9NW13 HTR7P1-201ENST00000538670 1336 ntBASIC22.63■■□□□ 1.21
RBM28Q9NW13 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RBM28Q9NW13 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.63■■□□□ 1.21
RBM28Q9NW13 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.63■■□□□ 1.21
RBM28Q9NW13 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
RBM28Q9NW13 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RBM28Q9NW13 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.63■■□□□ 1.21
RBM28Q9NW13 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RBM28Q9NW13 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.63■■□□□ 1.21
RBM28Q9NW13 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.63■■□□□ 1.21
RBM28Q9NW13 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RBM28Q9NW13 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RBM28Q9NW13 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RBM28Q9NW13 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RBM28Q9NW13 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RBM28Q9NW13 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RBM28Q9NW13 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RBM28Q9NW13 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RBM28Q9NW13 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RBM28Q9NW13 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RBM28Q9NW13 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.62■■□□□ 1.21
RBM28Q9NW13 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 AL353807.1-201ENST00000427475 662 ntBASIC22.62■■□□□ 1.21
RBM28Q9NW13 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RBM28Q9NW13 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RBM28Q9NW13 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RBM28Q9NW13 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RBM28Q9NW13 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RBM28Q9NW13 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RBM28Q9NW13 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RBM28Q9NW13 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms