Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KLHL1Q9NR64 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KLHL1Q9NR64 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 HLA-G-202ENST00000376815 851 ntBASIC18.31■□□□□ 0.52
KLHL1Q9NR64 HLA-G-203ENST00000376818 1127 ntBASIC18.31■□□□□ 0.52
KLHL1Q9NR64 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 AC012618.2-201ENST00000428058 849 ntBASIC18.31■□□□□ 0.52
KLHL1Q9NR64 TSPY7P-201ENST00000431358 1114 ntBASIC18.31■□□□□ 0.52
KLHL1Q9NR64 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 AC233702.5-201ENST00000584107 538 ntBASIC18.31■□□□□ 0.52
KLHL1Q9NR64 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KLHL1Q9NR64 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 SMG8-203ENST00000578922 2178 ntBASIC18.3■□□□□ 0.52
KLHL1Q9NR64 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KLHL1Q9NR64 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms