Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN4Q9NQP4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.18■□□□□ 0.66
PFDN4Q9NQP4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.18■□□□□ 0.66
PFDN4Q9NQP4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PFDN4Q9NQP4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN4Q9NQP4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN4Q9NQP4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN4Q9NQP4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN4Q9NQP4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN4Q9NQP4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PFDN4Q9NQP4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.17■□□□□ 0.66
PFDN4Q9NQP4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 AC080038.1-201ENST00000611274 1154 ntBASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
PFDN4Q9NQP4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 OR6D1P-202ENST00000641007 5290 ntBASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN4Q9NQP4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PFDN4Q9NQP4 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.14■□□□□ 0.66
PFDN4Q9NQP4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PFDN4Q9NQP4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PFDN4Q9NQP4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PFDN4Q9NQP4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PFDN4Q9NQP4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
PFDN4Q9NQP4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.14■□□□□ 0.65
PFDN4Q9NQP4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN4Q9NQP4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN4Q9NQP4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN4Q9NQP4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.14■□□□□ 0.65
PFDN4Q9NQP4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms