Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 GUSBP6-202ENST00000438529 1198 ntBASIC17.6■□□□□ 0.41
HINT3Q9NQE9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 C2orf69P4-201ENST00000565394 541 ntBASIC17.6■□□□□ 0.41
HINT3Q9NQE9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 NEFHP1-201ENST00000412845 2629 ntBASIC17.6■□□□□ 0.41
HINT3Q9NQE9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.6■□□□□ 0.41
HINT3Q9NQE9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HINT3Q9NQE9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HINT3Q9NQE9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HINT3Q9NQE9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HINT3Q9NQE9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HINT3Q9NQE9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HINT3Q9NQE9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.58■□□□□ 0.41
HINT3Q9NQE9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HINT3Q9NQE9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 AL589743.5-201ENST00000616611 1050 ntBASIC17.58■□□□□ 0.4
HINT3Q9NQE9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HINT3Q9NQE9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 AC010980.2-201ENST00000587099 1412 ntBASIC17.57■□□□□ 0.4
HINT3Q9NQE9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 AC142086.2-201ENST00000569753 217 ntBASIC17.57■□□□□ 0.4
HINT3Q9NQE9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.57■□□□□ 0.4
HINT3Q9NQE9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms