Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 AC073314.1-201ENST00000568729 2216 ntBASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 AC073508.3-201ENST00000619697 1419 ntBASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.51■□□□□ 0.71
TM9SF3Q9HD45 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 AC018553.1-201ENST00000616682 1458 ntBASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF3Q9HD45 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 B3GAT3P1-201ENST00000471720 806 ntBASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 KRT18P16-201ENST00000510337 1294 ntBASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF3Q9HD45 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 TUBB8P6-201ENST00000436895 1288 ntBASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF3Q9HD45 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF3Q9HD45 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms