Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A1Q9HD20 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ATP13A1Q9HD20 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ATP13A1Q9HD20 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ATP13A1Q9HD20 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A1Q9HD20 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20■□□□□ 0.79
ATP13A1Q9HD20 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
ATP13A1Q9HD20 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20■□□□□ 0.79
ATP13A1Q9HD20 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20■□□□□ 0.79
ATP13A1Q9HD20 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
ATP13A1Q9HD20 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20■□□□□ 0.79
ATP13A1Q9HD20 AL353807.1-201ENST00000427475 662 ntBASIC20■□□□□ 0.79
ATP13A1Q9HD20 AC012618.2-201ENST00000428058 849 ntBASIC20■□□□□ 0.79
ATP13A1Q9HD20 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20■□□□□ 0.79
ATP13A1Q9HD20 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 AC233702.5-201ENST00000584107 538 ntBASIC20■□□□□ 0.79
ATP13A1Q9HD20 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ATP13A1Q9HD20 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20■□□□□ 0.79
ATP13A1Q9HD20 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ATP13A1Q9HD20 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A1Q9HD20 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 AP002982.1-201ENST00000492365 877 ntBASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 C1QL1P1-201ENST00000568105 661 ntBASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP13A1Q9HD20 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 AF186192.3-201ENST00000583427 947 ntBASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 AP001412.1-201ENST00000608405 714 ntBASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP13A1Q9HD20 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.97■□□□□ 0.79
ATP13A1Q9HD20 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms