Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 MIR1224-201ENST00000408193 85 ntBASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 AP003071.4-201ENST00000562276 1284 ntBASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 CD177P1-201ENST00000606252 935 ntBASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
ATP6V0A4Q9HBG4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 NIFKP9-201ENST00000419265 221 ntBASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 KRT18P21-201ENST00000515767 1272 ntBASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 AC073195.1-201ENST00000607241 877 ntBASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A4Q9HBG4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A4Q9HBG4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 FAM197Y1-201ENST00000421178 764 ntBASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.67■■□□□ 1.06
ATP6V0A4Q9HBG4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 KRT8P8-201ENST00000434750 1448 ntBASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP6V0A4Q9HBG4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms