Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 AP000523.1-201ENST00000398242 1049 ntBASIC19.61■□□□□ 0.73
CHRDQ9H2X0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRDQ9H2X0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 CLDN5-201ENST00000403084 2357 ntBASIC19.6■□□□□ 0.73
CHRDQ9H2X0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRDQ9H2X0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 CKBP1-201ENST00000565489 1086 ntBASIC19.59■□□□□ 0.73
CHRDQ9H2X0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 AC083849.1-201ENST00000615227 514 ntBASIC19.59■□□□□ 0.73
CHRDQ9H2X0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHRDQ9H2X0 KRT8P45-201ENST00000414328 1447 ntBASIC19.59■□□□□ 0.73
CHRDQ9H2X0 AC092720.2-201ENST00000602388 1665 ntBASIC19.59■□□□□ 0.73
CHRDQ9H2X0 AC006128.1-201ENST00000624704 1661 ntBASIC19.59■□□□□ 0.73
CHRDQ9H2X0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.58■□□□□ 0.73
CHRDQ9H2X0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHRDQ9H2X0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CHRDQ9H2X0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHRDQ9H2X0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
CHRDQ9H2X0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRDQ9H2X0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHRDQ9H2X0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHRDQ9H2X0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHRDQ9H2X0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHRDQ9H2X0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.58■□□□□ 0.72
CHRDQ9H2X0 AC112907.2-201ENST00000448639 330 ntBASIC19.58■□□□□ 0.72
CHRDQ9H2X0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 ZNF444P1-201ENST00000559497 298 ntBASIC19.58■□□□□ 0.72
CHRDQ9H2X0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHRDQ9H2X0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.57■□□□□ 0.72
CHRDQ9H2X0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms