Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 B3GAT3P1-201ENST00000471720 806 ntBASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 AC145285.6-201ENST00000604632 637 ntBASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 HLA-A-209ENST00000638375 975 ntBASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 LINC01568-207ENST00000641790 1380 ntBASIC16.51■□□□□ 0.23
RAB1BQ9H0U4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 C2orf69P3-201ENST00000565542 1120 ntBASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1BQ9H0U4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 KRT18P22-201ENST00000402024 1347 ntBASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 AL390955.1-201ENST00000428694 934 ntBASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 AC097488.1-201ENST00000507834 756 ntBASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 AC005363.2-201ENST00000618631 242 ntBASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 FEM1AP1-201ENST00000431297 1995 ntBASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1BQ9H0U4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 AL512408.1-201ENST00000569378 2000 ntBASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 AC138932.1-201ENST00000534164 6830 ntBASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 AC009237.14-201ENST00000609975 1594 ntBASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 AC004951.3-201ENST00000418645 1148 ntBASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB1BQ9H0U4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms