Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
POLR1EQ9GZS1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 AC098590.1-201ENST00000468126 897 ntBASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR1EQ9GZS1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 AC142381.4-202ENST00000563973 229 ntBASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 C1QL1P1-201ENST00000568105 661 ntBASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 TMEM191A-211ENST00000637163 1067 ntBASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR1EQ9GZS1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
POLR1EQ9GZS1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
POLR1EQ9GZS1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
POLR1EQ9GZS1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 GCSHP5-201ENST00000443090 522 ntBASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR1EQ9GZS1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms