Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.39■■□□□ 1.02
TRIM6Q9C030 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM6Q9C030 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.39■■□□□ 1.02
TRIM6Q9C030 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM6Q9C030 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.39■■□□□ 1.01
TRIM6Q9C030 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TRIM6Q9C030 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM6Q9C030 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM6Q9C030 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.39■■□□□ 1.01
TRIM6Q9C030 TSPY15P-201ENST00000457163 923 ntBASIC21.39■■□□□ 1.01
TRIM6Q9C030 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.39■■□□□ 1.01
TRIM6Q9C030 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM6Q9C030 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM6Q9C030 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TRIM6Q9C030 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM6Q9C030 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.39■■□□□ 1.01
TRIM6Q9C030 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
TRIM6Q9C030 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.39■■□□□ 1.01
TRIM6Q9C030 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM6Q9C030 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRIM6Q9C030 AP001271.2-201ENST00000624018 1556 ntBASIC21.39■■□□□ 1.01
TRIM6Q9C030 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM6Q9C030 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
TRIM6Q9C030 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM6Q9C030 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM6Q9C030 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM6Q9C030 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM6Q9C030 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.38■■□□□ 1.01
TRIM6Q9C030 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM6Q9C030 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIM6Q9C030 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRIM6Q9C030 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM6Q9C030 GABARAPL3-202ENST00000624044 1851 ntBASIC21.38■■□□□ 1.01
TRIM6Q9C030 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM6Q9C030 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM6Q9C030 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM6Q9C030 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM6Q9C030 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6Q9C030 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM6Q9C030 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM6Q9C030 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6Q9C030 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6Q9C030 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6Q9C030 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6Q9C030 AC211429.1-201ENST00000415277 523 ntBASIC21.36■■□□□ 1.01
TRIM6Q9C030 ECEL1P3-201ENST00000427961 737 ntBASIC21.36■■□□□ 1.01
TRIM6Q9C030 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6Q9C030 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6Q9C030 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM6Q9C030 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6Q9C030 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6Q9C030 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6Q9C030 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TRIM6Q9C030 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM6Q9C030 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6Q9C030 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6Q9C030 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM6Q9C030 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6Q9C030 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TRIM6Q9C030 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM6Q9C030 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM6Q9C030 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
TRIM6Q9C030 LINC01023-201ENST00000606054 436 ntBASIC21.35■■□□□ 1.01
TRIM6Q9C030 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.35■■□□□ 1.01
TRIM6Q9C030 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM6Q9C030 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6Q9C030 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6Q9C030 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6Q9C030 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6Q9C030 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6Q9C030 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6Q9C030 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6Q9C030 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.34■■□□□ 1.01
TRIM6Q9C030 TMEM179-206ENST00000616017 1645 ntBASIC21.34■■□□□ 1.01
TRIM6Q9C030 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM6Q9C030 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRIM6Q9C030 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRIM6Q9C030 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6Q9C030 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM6Q9C030 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms