Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 HLA-B-256ENST00000639848 1089 ntBASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
UPF3BQ9BZI7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC23.22■■□□□ 1.31
UPF3BQ9BZI7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 PNMA6B-201ENST00000538162 1200 ntBASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 AC142086.2-201ENST00000569753 217 ntBASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.21■■□□□ 1.31
UPF3BQ9BZI7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
UPF3BQ9BZI7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 KRT18P6-201ENST00000555540 1265 ntBASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 AC060766.5-201ENST00000590539 871 ntBASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
UPF3BQ9BZI7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UPF3BQ9BZI7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.18■■□□□ 1.3
UPF3BQ9BZI7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
UPF3BQ9BZI7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.18■■□□□ 1.3
UPF3BQ9BZI7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms