Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TRAF4Q9BUZ4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAF4Q9BUZ4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAF4Q9BUZ4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.39■□□□□ 0.38
TRAF4Q9BUZ4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
TRAF4Q9BUZ4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.39■□□□□ 0.38
TRAF4Q9BUZ4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 AL356652.1-201ENST00000615962 565 ntBASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRAF4Q9BUZ4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF4Q9BUZ4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 MIR718-201ENST00000390190 70 ntBASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TRAF4Q9BUZ4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms