Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
UPK3BQ9BT76 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.56□□□□□ -0.24
UPK3BQ9BT76 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK3BQ9BT76 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UPK3BQ9BT76 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UPK3BQ9BT76 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.55□□□□□ -0.24
UPK3BQ9BT76 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 MIR4497-201ENST00000583208 89 ntBASIC13.54□□□□□ -0.24
UPK3BQ9BT76 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 Z99916.2-201ENST00000604037 246 ntBASIC13.54□□□□□ -0.24
UPK3BQ9BT76 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
UPK3BQ9BT76 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 PHGDH-210ENST00000641115 1638 ntBASIC13.53□□□□□ -0.24
UPK3BQ9BT76 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 AL596275.1-201ENST00000423464 877 ntBASIC13.53□□□□□ -0.24
UPK3BQ9BT76 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 AP006587.1-201ENST00000534129 1502 ntBASIC13.53□□□□□ -0.24
UPK3BQ9BT76 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
UPK3BQ9BT76 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms