Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.01■□□□□ 0.63
EBF4Q9BQW3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19■□□□□ 0.63
EBF4Q9BQW3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19■□□□□ 0.63
EBF4Q9BQW3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19■□□□□ 0.63
EBF4Q9BQW3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
EBF4Q9BQW3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
EBF4Q9BQW3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
EBF4Q9BQW3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
EBF4Q9BQW3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
EBF4Q9BQW3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19■□□□□ 0.63
EBF4Q9BQW3 MCRIP2P1-201ENST00000394346 511 ntBASIC19■□□□□ 0.63
EBF4Q9BQW3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19■□□□□ 0.63
EBF4Q9BQW3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19■□□□□ 0.63
EBF4Q9BQW3 AL162412.1-201ENST00000567129 965 ntBASIC19■□□□□ 0.63
EBF4Q9BQW3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19■□□□□ 0.63
EBF4Q9BQW3 AC005837.3-201ENST00000612163 286 ntBASIC19■□□□□ 0.63
EBF4Q9BQW3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19■□□□□ 0.63
EBF4Q9BQW3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19■□□□□ 0.63
EBF4Q9BQW3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19■□□□□ 0.63
EBF4Q9BQW3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
EBF4Q9BQW3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19■□□□□ 0.63
EBF4Q9BQW3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19■□□□□ 0.63
EBF4Q9BQW3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19■□□□□ 0.63
EBF4Q9BQW3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
EBF4Q9BQW3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19■□□□□ 0.63
EBF4Q9BQW3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EBF4Q9BQW3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 AL031598.1-201ENST00000561511 1773 ntBASIC18.98■□□□□ 0.63
EBF4Q9BQW3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EBF4Q9BQW3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EBF4Q9BQW3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EBF4Q9BQW3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.97■□□□□ 0.63
EBF4Q9BQW3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.97■□□□□ 0.63
EBF4Q9BQW3 FP475955.4-201ENST00000623131 1990 ntBASIC18.97■□□□□ 0.63
EBF4Q9BQW3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EBF4Q9BQW3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.97■□□□□ 0.63
EBF4Q9BQW3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
EBF4Q9BQW3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
EBF4Q9BQW3 MFSD11-216ENST00000590393 1141 ntBASIC18.97■□□□□ 0.63
EBF4Q9BQW3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
EBF4Q9BQW3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
EBF4Q9BQW3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms