Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SEMA3CQ99985 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3CQ99985 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3CQ99985 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.8■□□□□ 0.76
SEMA3CQ99985 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.8■□□□□ 0.76
SEMA3CQ99985 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.8■□□□□ 0.76
SEMA3CQ99985 AC142381.4-202ENST00000563973 229 ntBASIC19.8■□□□□ 0.76
SEMA3CQ99985 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.8■□□□□ 0.76
SEMA3CQ99985 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.8■□□□□ 0.76
SEMA3CQ99985 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.8■□□□□ 0.76
SEMA3CQ99985 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SEMA3CQ99985 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEMA3CQ99985 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.8■□□□□ 0.76
SEMA3CQ99985 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.8■□□□□ 0.76
SEMA3CQ99985 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3CQ99985 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3CQ99985 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3CQ99985 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3CQ99985 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 KRT8P8-201ENST00000434750 1448 ntBASIC19.79■□□□□ 0.76
SEMA3CQ99985 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3CQ99985 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3CQ99985 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3CQ99985 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 RPS2P4-201ENST00000476944 856 ntBASIC19.79■□□□□ 0.76
SEMA3CQ99985 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 FAM197Y4-202ENST00000622692 608 ntBASIC19.79■□□□□ 0.76
SEMA3CQ99985 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3CQ99985 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3CQ99985 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.79■□□□□ 0.76
SEMA3CQ99985 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEMA3CQ99985 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SEMA3CQ99985 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SEMA3CQ99985 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3CQ99985 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.78■□□□□ 0.76
SEMA3CQ99985 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SEMA3CQ99985 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
SEMA3CQ99985 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SEMA3CQ99985 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3CQ99985 AL596275.1-201ENST00000423464 877 ntBASIC19.78■□□□□ 0.76
SEMA3CQ99985 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3CQ99985 AL158047.1-201ENST00000445918 881 ntBASIC19.78■□□□□ 0.76
SEMA3CQ99985 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.78■□□□□ 0.76
SEMA3CQ99985 KRT16P5-201ENST00000455284 522 ntBASIC19.78■□□□□ 0.76
SEMA3CQ99985 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.78■□□□□ 0.76
SEMA3CQ99985 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.78■□□□□ 0.76
SEMA3CQ99985 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3CQ99985 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3CQ99985 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3CQ99985 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEMA3CQ99985 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
SEMA3CQ99985 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.77■□□□□ 0.76
SEMA3CQ99985 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.77■□□□□ 0.76
SEMA3CQ99985 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SEMA3CQ99985 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SEMA3CQ99985 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.77■□□□□ 0.76
SEMA3CQ99985 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.77■□□□□ 0.76
SEMA3CQ99985 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA3CQ99985 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
SEMA3CQ99985 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SEMA3CQ99985 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.76■□□□□ 0.75
SEMA3CQ99985 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.76■□□□□ 0.75
SEMA3CQ99985 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SEMA3CQ99985 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA3CQ99985 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA3CQ99985 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA3CQ99985 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA3CQ99985 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.76■□□□□ 0.75
SEMA3CQ99985 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.76■□□□□ 0.75
SEMA3CQ99985 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3CQ99985 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms