Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.49■□□□□ 0.71
CPNE1Q99829 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.49■□□□□ 0.71
CPNE1Q99829 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CPNE1Q99829 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CPNE1Q99829 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.49■□□□□ 0.71
CPNE1Q99829 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE1Q99829 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE1Q99829 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE1Q99829 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE1Q99829 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE1Q99829 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CPNE1Q99829 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.48■□□□□ 0.71
CPNE1Q99829 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE1Q99829 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.48■□□□□ 0.71
CPNE1Q99829 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.48■□□□□ 0.71
CPNE1Q99829 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE1Q99829 IKBKGP1-201ENST00000612193 1073 ntBASIC19.48■□□□□ 0.71
CPNE1Q99829 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE1Q99829 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE1Q99829 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE1Q99829 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE1Q99829 AC120498.9-201ENST00000339021 3867 ntBASIC19.48■□□□□ 0.71
CPNE1Q99829 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CPNE1Q99829 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE1Q99829 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CPNE1Q99829 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.47■□□□□ 0.71
CPNE1Q99829 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.47■□□□□ 0.71
CPNE1Q99829 AC141586.3-201ENST00000562166 1838 ntBASIC19.47■□□□□ 0.71
CPNE1Q99829 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE1Q99829 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.47■□□□□ 0.71
CPNE1Q99829 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.47■□□□□ 0.71
CPNE1Q99829 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE1Q99829 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.47■□□□□ 0.71
CPNE1Q99829 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.47■□□□□ 0.71
CPNE1Q99829 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.47■□□□□ 0.71
CPNE1Q99829 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.47■□□□□ 0.71
CPNE1Q99829 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CPNE1Q99829 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CPNE1Q99829 ZNF815P-204ENST00000434898 1737 ntBASIC19.47■□□□□ 0.71
CPNE1Q99829 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.47■□□□□ 0.71
CPNE1Q99829 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE1Q99829 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.46■□□□□ 0.71
CPNE1Q99829 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.46■□□□□ 0.71
CPNE1Q99829 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.46■□□□□ 0.71
CPNE1Q99829 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.46■□□□□ 0.71
CPNE1Q99829 MIPEPP3-201ENST00000412105 444 ntBASIC19.46■□□□□ 0.71
CPNE1Q99829 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CPNE1Q99829 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CPNE1Q99829 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.46■□□□□ 0.71
CPNE1Q99829 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
CPNE1Q99829 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.46■□□□□ 0.71
CPNE1Q99829 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.46■□□□□ 0.71
CPNE1Q99829 RAP2CP1-201ENST00000605103 478 ntBASIC19.46■□□□□ 0.71
CPNE1Q99829 AL137784.2-201ENST00000607332 1000 ntBASIC19.46■□□□□ 0.71
CPNE1Q99829 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CPNE1Q99829 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPNE1Q99829 TEX21P-204ENST00000641479 1693 ntBASIC19.46■□□□□ 0.71
CPNE1Q99829 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CPNE1Q99829 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CPNE1Q99829 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CPNE1Q99829 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CPNE1Q99829 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.45■□□□□ 0.7
CPNE1Q99829 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CPNE1Q99829 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CPNE1Q99829 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.45■□□□□ 0.7
CPNE1Q99829 AL161938.1-201ENST00000569833 2180 ntBASIC19.45■□□□□ 0.7
CPNE1Q99829 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms