Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC6Q99741 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.87■□□□□ 0.61
CDC6Q99741 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDC6Q99741 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC6Q99741 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.87■□□□□ 0.61
CDC6Q99741 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.87■□□□□ 0.61
CDC6Q99741 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.87■□□□□ 0.61
CDC6Q99741 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.87■□□□□ 0.61
CDC6Q99741 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.87■□□□□ 0.61
CDC6Q99741 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC6Q99741 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDC6Q99741 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC6Q99741 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.86■□□□□ 0.61
CDC6Q99741 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDC6Q99741 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.86■□□□□ 0.61
CDC6Q99741 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 DUSP5P1-201ENST00000441325 1139 ntBASIC18.86■□□□□ 0.61
CDC6Q99741 HCG4P8-203ENST00000443049 980 ntBASIC18.86■□□□□ 0.61
CDC6Q99741 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 AC008622.2-201ENST00000617006 1229 ntBASIC18.86■□□□□ 0.61
CDC6Q99741 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 AC007375.3-201ENST00000600936 2314 ntBASIC18.86■□□□□ 0.61
CDC6Q99741 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CDC6Q99741 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.86■□□□□ 0.61
CDC6Q99741 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CDC6Q99741 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC6Q99741 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CDC6Q99741 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CDC6Q99741 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC6Q99741 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC6Q99741 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.85■□□□□ 0.61
CDC6Q99741 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDC6Q99741 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC6Q99741 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDC6Q99741 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC6Q99741 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC6Q99741 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CDC6Q99741 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC6Q99741 AL359075.1-203ENST00000462729 1002 ntBASIC18.85■□□□□ 0.61
CDC6Q99741 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.85■□□□□ 0.61
CDC6Q99741 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.85■□□□□ 0.61
CDC6Q99741 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CDC6Q99741 AC069148.1-201ENST00000608741 768 ntBASIC18.85■□□□□ 0.61
CDC6Q99741 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
CDC6Q99741 AL691432.3-201ENST00000621860 400 ntBASIC18.85■□□□□ 0.61
CDC6Q99741 AC116407.4-201ENST00000623319 1061 ntBASIC18.85■□□□□ 0.61
CDC6Q99741 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDC6Q99741 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC6Q99741 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.85■□□□□ 0.61
CDC6Q99741 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDC6Q99741 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CDC6Q99741 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC6Q99741 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDC6Q99741 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.85■□□□□ 0.61
CDC6Q99741 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC6Q99741 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDC6Q99741 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDC6Q99741 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC6Q99741 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDC6Q99741 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.84■□□□□ 0.61
CDC6Q99741 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.84■□□□□ 0.61
CDC6Q99741 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC6Q99741 AP000523.1-201ENST00000398242 1049 ntBASIC18.84■□□□□ 0.61
CDC6Q99741 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.84■□□□□ 0.61
CDC6Q99741 Z85996.1-201ENST00000494644 937 ntBASIC18.84■□□□□ 0.61
CDC6Q99741 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.84■□□□□ 0.61
CDC6Q99741 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.84■□□□□ 0.61
CDC6Q99741 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.84■□□□□ 0.61
CDC6Q99741 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC6Q99741 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.84■□□□□ 0.61
CDC6Q99741 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CDC6Q99741 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC6Q99741 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC6Q99741 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC6Q99741 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC6Q99741 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC6Q99741 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.84■□□□□ 0.61
CDC6Q99741 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDC6Q99741 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.83■□□□□ 0.61
CDC6Q99741 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC6Q99741 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
CDC6Q99741 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CDC6Q99741 AC005332.1-201ENST00000577698 1310 ntBASIC18.83■□□□□ 0.61
CDC6Q99741 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDC6Q99741 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC6Q99741 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.83■□□□□ 0.6
CDC6Q99741 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDC6Q99741 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms