Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TWNKQ96RR1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TWNKQ96RR1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TWNKQ96RR1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
TWNKQ96RR1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TWNKQ96RR1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TWNKQ96RR1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TWNKQ96RR1 RPS2P55-201ENST00000397318 883 ntBASIC20.73■□□□□ 0.91
TWNKQ96RR1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TWNKQ96RR1 AC107956.1-201ENST00000494359 873 ntBASIC20.73■□□□□ 0.91
TWNKQ96RR1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.73■□□□□ 0.91
TWNKQ96RR1 AF186192.3-201ENST00000583427 947 ntBASIC20.73■□□□□ 0.91
TWNKQ96RR1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.73■□□□□ 0.91
TWNKQ96RR1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TWNKQ96RR1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TWNKQ96RR1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
TWNKQ96RR1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TWNKQ96RR1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.73■□□□□ 0.91
TWNKQ96RR1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TWNKQ96RR1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TWNKQ96RR1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TWNKQ96RR1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TWNKQ96RR1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TWNKQ96RR1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 RPS2P4-201ENST00000476944 856 ntBASIC20.72■□□□□ 0.91
TWNKQ96RR1 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 AC233702.5-201ENST00000584107 538 ntBASIC20.72■□□□□ 0.91
TWNKQ96RR1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TWNKQ96RR1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TWNKQ96RR1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.72■□□□□ 0.91
TWNKQ96RR1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TWNKQ96RR1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TWNKQ96RR1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TWNKQ96RR1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TWNKQ96RR1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TWNKQ96RR1 AC093827.2-201ENST00000512654 315 ntBASIC20.71■□□□□ 0.91
TWNKQ96RR1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TWNKQ96RR1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TWNKQ96RR1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TWNKQ96RR1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TWNKQ96RR1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.71■□□□□ 0.91
TWNKQ96RR1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
TWNKQ96RR1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.7■□□□□ 0.91
TWNKQ96RR1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TWNKQ96RR1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.7■□□□□ 0.9
TWNKQ96RR1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.7■□□□□ 0.9
TWNKQ96RR1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.7■□□□□ 0.9
TWNKQ96RR1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.7■□□□□ 0.9
TWNKQ96RR1 NIFKP9-201ENST00000419265 221 ntBASIC20.7■□□□□ 0.9
TWNKQ96RR1 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.7■□□□□ 0.9
TWNKQ96RR1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.7■□□□□ 0.9
TWNKQ96RR1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.7■□□□□ 0.9
TWNKQ96RR1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.7■□□□□ 0.9
TWNKQ96RR1 AL353708.3-201ENST00000610272 989 ntBASIC20.7■□□□□ 0.9
TWNKQ96RR1 AC113410.3-201ENST00000623366 203 ntBASIC20.7■□□□□ 0.9
TWNKQ96RR1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.7■□□□□ 0.9
TWNKQ96RR1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.7■□□□□ 0.9
TWNKQ96RR1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TWNKQ96RR1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWNKQ96RR1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.69■□□□□ 0.9
TWNKQ96RR1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWNKQ96RR1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TWNKQ96RR1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.69■□□□□ 0.9
TWNKQ96RR1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TWNKQ96RR1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.69■□□□□ 0.9
TWNKQ96RR1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.69■□□□□ 0.9
TWNKQ96RR1 AC012618.2-201ENST00000428058 849 ntBASIC20.69■□□□□ 0.9
TWNKQ96RR1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TWNKQ96RR1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms