Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 AC110285.6-201ENST00000617652 491 ntBASIC14.89□□□□□ -0.03
LINC00479Q96M42 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00479Q96M42 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
LINC00479Q96M42 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00479Q96M42 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00479Q96M42 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 AC135050.7-201ENST00000624508 2218 ntBASIC14.88□□□□□ -0.03
LINC00479Q96M42 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00479Q96M42 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.88□□□□□ -0.03
LINC00479Q96M42 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
LINC00479Q96M42 AL031963.3-201ENST00000606441 850 ntBASIC14.88□□□□□ -0.03
LINC00479Q96M42 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.88□□□□□ -0.03
LINC00479Q96M42 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00479Q96M42 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00479Q96M42 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00479Q96M42 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LINC00479Q96M42 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00479Q96M42 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00479Q96M42 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00479Q96M42 LINC02228-203ENST00000641970 1355 ntBASIC14.87□□□□□ -0.03
LINC00479Q96M42 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
LINC00479Q96M42 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LINC00479Q96M42 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINC00479Q96M42 KRT8P20-201ENST00000423953 1409 ntBASIC14.87□□□□□ -0.03
LINC00479Q96M42 PCDHB18P-201ENST00000524813 2368 ntBASIC14.87□□□□□ -0.03
LINC00479Q96M42 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 SUDS3P1-201ENST00000505831 966 ntBASIC14.87□□□□□ -0.03
LINC00479Q96M42 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00479Q96M42 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00479Q96M42 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00479Q96M42 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00479Q96M42 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00479Q96M42 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00479Q96M42 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms