Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTP4Q96DX8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTP4Q96DX8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 KRT18P29-201ENST00000397031 1267 ntBASIC19.89■□□□□ 0.77
RTP4Q96DX8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTP4Q96DX8 KRT8P8-201ENST00000434750 1448 ntBASIC19.89■□□□□ 0.77
RTP4Q96DX8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.89■□□□□ 0.77
RTP4Q96DX8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTP4Q96DX8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTP4Q96DX8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTP4Q96DX8 AL121829.2-201ENST00000620908 328 ntBASIC19.89■□□□□ 0.77
RTP4Q96DX8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTP4Q96DX8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTP4Q96DX8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.89■□□□□ 0.77
RTP4Q96DX8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.88■□□□□ 0.77
RTP4Q96DX8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 AC104417.2-201ENST00000562989 1793 ntBASIC19.88■□□□□ 0.77
RTP4Q96DX8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 KRT18P16-201ENST00000510337 1294 ntBASIC19.88■□□□□ 0.77
RTP4Q96DX8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RTP4Q96DX8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTP4Q96DX8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTP4Q96DX8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTP4Q96DX8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTP4Q96DX8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTP4Q96DX8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTP4Q96DX8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTP4Q96DX8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RTP4Q96DX8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTP4Q96DX8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTP4Q96DX8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.86■□□□□ 0.77
RTP4Q96DX8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.86■□□□□ 0.77
RTP4Q96DX8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.86■□□□□ 0.77
RTP4Q96DX8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.86■□□□□ 0.77
RTP4Q96DX8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.86■□□□□ 0.77
RTP4Q96DX8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms