Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.31■□□□□ 0.68
SH3KBP1Q96B97 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.31■□□□□ 0.68
SH3KBP1Q96B97 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SH3KBP1Q96B97 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH3KBP1Q96B97 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.31■□□□□ 0.68
SH3KBP1Q96B97 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SH3KBP1Q96B97 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SH3KBP1Q96B97 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.31■□□□□ 0.68
SH3KBP1Q96B97 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH3KBP1Q96B97 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 KRT17P2-201ENST00000300992 1314 ntBASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 AL353807.1-201ENST00000427475 662 ntBASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.3■□□□□ 0.68
SH3KBP1Q96B97 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 BX119927.1-201ENST00000636596 1552 ntBASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 SNORA78-201ENST00000459373 127 ntBASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 AL049637.2-201ENST00000641778 930 ntBASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.29■□□□□ 0.68
SH3KBP1Q96B97 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.28■□□□□ 0.68
SH3KBP1Q96B97 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.27■□□□□ 0.68
SH3KBP1Q96B97 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms