Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A3Q93084 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A3Q93084 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2A3Q93084 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A3Q93084 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A3Q93084 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ATP2A3Q93084 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2A3Q93084 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A3Q93084 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.52■□□□□ 0.88
ATP2A3Q93084 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2A3Q93084 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
ATP2A3Q93084 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2A3Q93084 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A3Q93084 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A3Q93084 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
ATP2A3Q93084 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP2A3Q93084 KRT8P17-201ENST00000453110 1448 ntBASIC20.52■□□□□ 0.87
ATP2A3Q93084 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATP2A3Q93084 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ATP2A3Q93084 AC112907.3-201ENST00000577781 2400 ntBASIC20.51■□□□□ 0.87
ATP2A3Q93084 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 FAM197Y1-201ENST00000421178 764 ntBASIC20.51■□□□□ 0.87
ATP2A3Q93084 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 AP002982.1-201ENST00000492365 877 ntBASIC20.51■□□□□ 0.87
ATP2A3Q93084 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.51■□□□□ 0.87
ATP2A3Q93084 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ATP2A3Q93084 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.51■□□□□ 0.87
ATP2A3Q93084 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATP2A3Q93084 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2A3Q93084 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP2A3Q93084 AL162377.1-201ENST00000618844 1793 ntBASIC20.51■□□□□ 0.87
ATP2A3Q93084 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP2A3Q93084 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP2A3Q93084 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 AL353708.3-201ENST00000610272 989 ntBASIC20.5■□□□□ 0.87
ATP2A3Q93084 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.5■□□□□ 0.87
ATP2A3Q93084 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP2A3Q93084 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP2A3Q93084 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP2A3Q93084 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A3Q93084 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP2A3Q93084 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms