Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.04■□□□□ 0.32
USP9XQ93008 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.04■□□□□ 0.32
USP9XQ93008 CHCHD2P8-201ENST00000429873 447 ntBASIC17.04■□□□□ 0.32
USP9XQ93008 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.04■□□□□ 0.32
USP9XQ93008 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP9XQ93008 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP9XQ93008 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP9XQ93008 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP9XQ93008 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP9XQ93008 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.04■□□□□ 0.32
USP9XQ93008 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP9XQ93008 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.04■□□□□ 0.32
USP9XQ93008 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.04■□□□□ 0.32
USP9XQ93008 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.04■□□□□ 0.32
USP9XQ93008 AC012615.1-201ENST00000565797 1299 ntBASIC17.04■□□□□ 0.32
USP9XQ93008 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.04■□□□□ 0.32
USP9XQ93008 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
USP9XQ93008 AC005229.4-201ENST00000610085 2198 ntBASIC17.04■□□□□ 0.32
USP9XQ93008 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.03■□□□□ 0.32
USP9XQ93008 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP9XQ93008 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.03■□□□□ 0.32
USP9XQ93008 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.03■□□□□ 0.32
USP9XQ93008 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP9XQ93008 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP9XQ93008 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP9XQ93008 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP9XQ93008 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP9XQ93008 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
USP9XQ93008 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP9XQ93008 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP9XQ93008 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
USP9XQ93008 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.03■□□□□ 0.32
USP9XQ93008 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP9XQ93008 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP9XQ93008 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP9XQ93008 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.02■□□□□ 0.32
USP9XQ93008 SLC25A1P1-201ENST00000528351 927 ntBASIC17.02■□□□□ 0.32
USP9XQ93008 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.02■□□□□ 0.32
USP9XQ93008 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP9XQ93008 AL121672.3-201ENST00000608644 468 ntBASIC17.02■□□□□ 0.32
USP9XQ93008 AF228730.7-201ENST00000641842 219 ntBASIC17.02■□□□□ 0.32
USP9XQ93008 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
USP9XQ93008 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP9XQ93008 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP9XQ93008 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.02■□□□□ 0.32
USP9XQ93008 LINC01465-201ENST00000408887 1940 ntBASIC17.02■□□□□ 0.32
USP9XQ93008 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP9XQ93008 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.02■□□□□ 0.31
USP9XQ93008 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP9XQ93008 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.31
USP9XQ93008 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
USP9XQ93008 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
USP9XQ93008 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
USP9XQ93008 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.02■□□□□ 0.31
USP9XQ93008 MIR574-201ENST00000385209 96 ntBASIC17.02■□□□□ 0.31
USP9XQ93008 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
USP9XQ93008 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP9XQ93008 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.02■□□□□ 0.31
USP9XQ93008 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
USP9XQ93008 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.02■□□□□ 0.31
USP9XQ93008 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.02■□□□□ 0.31
USP9XQ93008 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP9XQ93008 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP9XQ93008 AC242852.2-201ENST00000615738 1807 ntBASIC17.02■□□□□ 0.31
USP9XQ93008 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP9XQ93008 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
USP9XQ93008 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
USP9XQ93008 NUS1P1-201ENST00000446295 882 ntBASIC17.01■□□□□ 0.31
USP9XQ93008 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.01■□□□□ 0.31
USP9XQ93008 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.01■□□□□ 0.31
USP9XQ93008 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
USP9XQ93008 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP9XQ93008 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP9XQ93008 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP9XQ93008 AL162741.1-201ENST00000565563 1558 ntBASIC17.01■□□□□ 0.31
USP9XQ93008 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.01■□□□□ 0.31
USP9XQ93008 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP9XQ93008 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
USP9XQ93008 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
USP9XQ93008 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP9XQ93008 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.01■□□□□ 0.31
USP9XQ93008 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.01■□□□□ 0.31
USP9XQ93008 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
USP9XQ93008 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.01■□□□□ 0.31
USP9XQ93008 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.01■□□□□ 0.31
USP9XQ93008 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP9XQ93008 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP9XQ93008 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17■□□□□ 0.31
USP9XQ93008 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17■□□□□ 0.31
USP9XQ93008 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17■□□□□ 0.31
USP9XQ93008 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
USP9XQ93008 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP9XQ93008 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17■□□□□ 0.31
USP9XQ93008 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
USP9XQ93008 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP9XQ93008 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17■□□□□ 0.31
USP9XQ93008 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17■□□□□ 0.31
USP9XQ93008 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP9XQ93008 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17■□□□□ 0.31
USP9XQ93008 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms