Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 AC105036.2-201ENST00000569468 176 ntBASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 AL589743.5-201ENST00000616611 1050 ntBASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 NEFHP1-201ENST00000412845 2629 ntBASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4IP1Q8WWV3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RTN4IP1Q8WWV3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RTN4IP1Q8WWV3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 MKRN4P-201ENST00000444706 1521 ntBASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.39■□□□□ 0.21
RTN4IP1Q8WWV3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RTN4IP1Q8WWV3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RTN4IP1Q8WWV3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms