Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD6Q8TD26 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD6Q8TD26 SCARNA2-201ENST00000458748 420 ntBASIC17.7■□□□□ 0.42
CHD6Q8TD26 AC093909.1-201ENST00000504731 1122 ntBASIC17.7■□□□□ 0.42
CHD6Q8TD26 AL356488.2-201ENST00000602755 427 ntBASIC17.7■□□□□ 0.42
CHD6Q8TD26 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 MIR770-201ENST00000390219 98 ntBASIC17.69■□□□□ 0.42
CHD6Q8TD26 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 AC112482.1-201ENST00000492080 688 ntBASIC17.69■□□□□ 0.42
CHD6Q8TD26 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 AL591424.1-201ENST00000442569 1213 ntBASIC17.69■□□□□ 0.42
CHD6Q8TD26 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD6Q8TD26 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD6Q8TD26 AL096865.1-201ENST00000606796 927 ntBASIC17.69■□□□□ 0.42
CHD6Q8TD26 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 MED15P5-201ENST00000423150 992 ntBASIC17.68■□□□□ 0.42
CHD6Q8TD26 AC018712.1-201ENST00000455767 687 ntBASIC17.68■□□□□ 0.42
CHD6Q8TD26 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD6Q8TD26 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHD6Q8TD26 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD6Q8TD26 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD6Q8TD26 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.68■□□□□ 0.42
CHD6Q8TD26 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHD6Q8TD26 AL596442.2-201ENST00000610240 980 ntBASIC17.68■□□□□ 0.42
CHD6Q8TD26 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.68■□□□□ 0.42
CHD6Q8TD26 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.68■□□□□ 0.42
CHD6Q8TD26 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD6Q8TD26 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHD6Q8TD26 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHD6Q8TD26 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD6Q8TD26 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHD6Q8TD26 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 AC145285.3-201ENST00000564603 959 ntBASIC17.67■□□□□ 0.42
CHD6Q8TD26 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD6Q8TD26 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 AC004832.2-201ENST00000426397 482 ntBASIC17.67■□□□□ 0.42
CHD6Q8TD26 AL645939.2-201ENST00000427340 991 ntBASIC17.67■□□□□ 0.42
CHD6Q8TD26 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHD6Q8TD26 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD6Q8TD26 MIR7706-201ENST00000613747 67 ntBASIC17.67■□□□□ 0.42
CHD6Q8TD26 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHD6Q8TD26 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.67■□□□□ 0.42
CHD6Q8TD26 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD6Q8TD26 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 SEC1P-202ENST00000473944 940 ntBASIC17.66■□□□□ 0.42
CHD6Q8TD26 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHD6Q8TD26 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms