Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 EDA-201ENST00000338901 1233 ntBASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 AC097381.1-201ENST00000429019 1296 ntBASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 TEX21P-204ENST00000641479 1693 ntBASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNIH3Q8TBE1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 AP000997.3-201ENST00000623333 2250 ntBASIC17.81■□□□□ 0.44
CNIH3Q8TBE1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 AC141586.3-201ENST00000562166 1838 ntBASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 AL031963.3-201ENST00000606441 850 ntBASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 AL031598.1-201ENST00000561511 1773 ntBASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 AL354751.1-201ENST00000412768 1863 ntBASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH3Q8TBE1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 NOC2LP1-202ENST00000452600 2235 ntBASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 BICD1-207ENST00000551848 1962 ntBASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 KRT18P20-201ENST00000548986 1279 ntBASIC17.79■□□□□ 0.44
CNIH3Q8TBE1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms