Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
LINC01006Q8NI28 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01006Q8NI28 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01006Q8NI28 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01006Q8NI28 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 UPK3BP1-201ENST00000428678 509 ntBASIC15.2■□□□□ 0.02
LINC01006Q8NI28 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01006Q8NI28 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.19■□□□□ 0.02
LINC01006Q8NI28 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 AL031133.1-201ENST00000406807 723 ntBASIC15.19■□□□□ 0.02
LINC01006Q8NI28 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 CA15P1-201ENST00000481698 905 ntBASIC15.19■□□□□ 0.02
LINC01006Q8NI28 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 AL031432.5-201ENST00000641059 760 ntBASIC15.19■□□□□ 0.02
LINC01006Q8NI28 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LINC01006Q8NI28 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 LINC01465-201ENST00000408887 1940 ntBASIC15.18■□□□□ 0.02
LINC01006Q8NI28 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 AC011558.1-201ENST00000623459 338 ntBASIC15.18■□□□□ 0.02
LINC01006Q8NI28 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 FEM1AP1-201ENST00000431297 1995 ntBASIC15.18■□□□□ 0.02
LINC01006Q8NI28 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC01006Q8NI28 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.17■□□□□ 0.02
LINC01006Q8NI28 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01006Q8NI28 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms