Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNE1Q8NF91 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC6.01□□□□□ -1.45
SYNE1Q8NF91 AL121829.2-201ENST00000620908 328 ntBASIC6.01□□□□□ -1.45
SYNE1Q8NF91 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 TERF1P1-201ENST00000311003 1181 ntBASIC6□□□□□ -1.45
SYNE1Q8NF91 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 NTF6B-201ENST00000591913 560 ntBASIC6□□□□□ -1.45
SYNE1Q8NF91 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC6□□□□□ -1.45
SYNE1Q8NF91 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
SYNE1Q8NF91 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC6□□□□□ -1.45
SYNE1Q8NF91 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 AFG3L1P-217ENST00000557444 2447 ntBASIC6□□□□□ -1.45
SYNE1Q8NF91 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
SYNE1Q8NF91 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 KRT18P22-201ENST00000402024 1347 ntBASIC6□□□□□ -1.45
SYNE1Q8NF91 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC6□□□□□ -1.45
SYNE1Q8NF91 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
SYNE1Q8NF91 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC6□□□□□ -1.45
SYNE1Q8NF91 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE1Q8NF91 AL031963.3-201ENST00000606441 850 ntBASIC6□□□□□ -1.45
SYNE1Q8NF91 DECR2-212ENST00000627716 352 ntTSL 2 BASIC6□□□□□ -1.45
SYNE1Q8NF91 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 KRT18P57-201ENST00000443599 1254 ntBASIC5.99□□□□□ -1.45
SYNE1Q8NF91 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNE1Q8NF91 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms