Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 AL133373.2-201ENST00000623187 2828 ntBASIC18.9■□□□□ 0.62
HIPK4Q8NE63 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 AC009113.1-201ENST00000570267 2443 ntBASIC18.9■□□□□ 0.62
HIPK4Q8NE63 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIPK4Q8NE63 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.89■□□□□ 0.62
HIPK4Q8NE63 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HIPK4Q8NE63 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.89■□□□□ 0.62
HIPK4Q8NE63 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 AC019069.1-201ENST00000610008 1333 ntBASIC18.89■□□□□ 0.61
HIPK4Q8NE63 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.89■□□□□ 0.61
HIPK4Q8NE63 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 CDV3P1-201ENST00000471403 739 ntBASIC18.88■□□□□ 0.61
HIPK4Q8NE63 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIPK4Q8NE63 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HIPK4Q8NE63 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 CROCCP3-202ENST00000420820 1947 ntBASIC18.86■□□□□ 0.61
HIPK4Q8NE63 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 KRT19P1-201ENST00000405746 1186 ntBASIC18.86■□□□□ 0.61
HIPK4Q8NE63 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms