Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 BCL2-203ENST00000589955 5011 ntBASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 AC105233.4-201ENST00000642045 216 ntBASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 AC067852.2-201ENST00000590513 2313 ntBASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC197Q8NCU1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 MKRN4P-201ENST00000444706 1521 ntBASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 AC141586.3-201ENST00000562166 1838 ntBASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC197Q8NCU1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 FP475955.4-201ENST00000623131 1990 ntBASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC197Q8NCU1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC197Q8NCU1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC197Q8NCU1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC197Q8NCU1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC197Q8NCU1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC197Q8NCU1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC197Q8NCU1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC197Q8NCU1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC197Q8NCU1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 BX842568.3-201ENST00000418104 571 ntBASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 IGHV3-19-201ENST00000521488 291 ntBASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 AC120498.10-201ENST00000621827 505 ntBASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC197Q8NCU1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC197Q8NCU1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC197Q8NCU1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC197Q8NCU1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
CCDC197Q8NCU1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms